cellpose
cellpose is an anatomical segmentation algorithm written in Python 3 by Carsen Stringer and Marius Pachitariu. For support, please open an issue.
We make pip installable releases of cellpose, here is the pypi. You
can install it as pip install cellpose[gui].
You can try it out without installing at cellpose.org. Also check out these resources:
Cellpose 2.0
Cellpose 1.0
paper on biorxiv (see figure 1 below) and in nature methods
twitter `thread`_
Marius’s talk
